DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and mespb

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001016653.1 Gene:mespb / 549407 XenbaseID:XB-GENE-970939 Length:292 Species:Xenopus tropicalis


Alignment Length:202 Identity:48/202 - (23%)
Similarity:72/202 - (35%) Gaps:40/202 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PRSHSRNGLLTAPASSGSSVG----------------------GSGGGGGNGSGGNASSGGGSGV 159
            |.|...:.|  :||||..|.|                      |.......|...:|...|....
 Frog    28 PSSEGYSSL--SPASSSDSSGQSPPYMPYIASQEIFVNIPAAYGQAACQRRGLRHDADKRGKKNT 90

  Fly   160 GATGGVRKVFTNTRERWRQQNVSGAFAELRKLVP--THPPDKKLSKNEILRSAIKYIKLLT---G 219
            |.....::...:.||:.|.:|:|.|...||:.:|  ..|.||.|:|.|.|:..|.||..|:   |
 Frog    91 GKLPYSQRQSASEREKLRMRNLSKALQNLRRYLPPSVAPLDKTLTKIETLQLTISYISHLSAQLG 155

  Fly   220 ILE---WQQRQAPSHPIRAQMEPN------NNDNRMANGHAADGENLENPDVPPVRHIKCERTDG 275
            :.|   .|:|.|.:.  |..:.|:      :..:|:......|..|.......|....:|....|
 Frog   156 LTEEILTQRRLAETQ--RTNLCPSGFSCCMDPTHRLCTTPEEDHFNPAATPTMPFSEARCYPEPG 218

  Fly   276 QMHRNGI 282
            ...|..:
 Frog   219 YHGREAV 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 21/55 (38%)
mespbNP_001016653.1 HLH 97..150 CDD:278439 19/52 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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