DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and Atoh7

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_058560.1 Gene:Atoh7 / 53404 MGIID:1355553 Length:149 Species:Mus musculus


Alignment Length:129 Identity:43/129 - (33%)
Similarity:60/129 - (46%) Gaps:15/129 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPP 197
            |...|..|.....|:...|.|..|.|...:...|::..|.|||.|.|.::.||..||::||....
Mouse     9 GPPAGARGAPPCAGAAERAVSCAGPGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQ 73

  Fly   198 DKKLSKNEILRSAIKYIKLLTGIL-----EWQ----QRQAPSHP------IRAQMEPNNNDNRM 246
            ||||||.|.|:.|:.||..||.||     :|.    :::...||      .|.|::|.....|:
Mouse    74 DKKLSKYETLQMALSYIIALTRILAEAERDWVGLRCEQRGRDHPYLPFPGARLQVDPEPYGQRL 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 29/67 (43%)
Atoh7NP_058560.1 bHLH_TS_ATOH7 35..102 CDD:381557 28/66 (42%)

Return to query results.
Submit another query.