Protein Alignment HLH3B and Atoh1

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001102708.1
• Gene: Atoh1 / 500156
• RGDID: 1565171
• Length: 351
• Species: Rattus norvegicus
• Alignment Length: 229
• Identity: 56/229 - (24%)
• Similarity: 81/229 - (35%)
• Gaps: 83/229 - (36%)

  Fly    52 RHPPALLRHATPHLQPK-TESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSS 115
            |||..   |..|.|.|: ..::...|.....::.||.|                         |:
  Rat    21 RHPQP---HHIPQLTPQPPATLQARDHPVYPAELSLLD-------------------------ST 57

  Fly   116 SPR---SHSRNGLLTAPASS--------GSSVGGSGGGGGNGSGGNASSGGGSGVGAT------- 162
            .||   :.:..||.||.|:.        |:|...:.|...:|.|......|..|:..:
  Rat    58 DPRAWLTPTLQGLCTARAAQYLLHSPELGASEAAAPGDEADGQGELVRRSGCGGLSKSPGPVKVR 122

  Fly   163 -------GGV------------------------RKVFTNTRERWRQQNVSGAFAELRKLVPTHP 196
                   |||                        |::..|.|||.|...::.||.:||.::|:..
  Rat   123 EQLCKLKGGVVVDELGCSRQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFN 187

  Fly   197 PDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPS 230
            .||||||.|.|:.|..||..|:.:|     |.||
  Rat   188 NDKKLSKYETLQMAQIYINALSELL-----QTPS 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	24/58 (41%)
Atoh1	NP_001102708.1	bHLH_TS_ATOH1	152..215	CDD:381556	25/67 (37%)