DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and NEUROG1

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_006152.2 Gene:NEUROG1 / 4762 HGNCID:7764 Length:237 Species:Homo sapiens


Alignment Length:265 Identity:58/265 - (21%)
Similarity:86/265 - (32%) Gaps:87/265 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ADERSTASSGSSGHSQTNESPRSGHLNGN---GSMRDTAAGRHPPALLRHATPHLQPKTESISDG 75
            :|....:||||.         .||.|...   ..::..|:...|||..|...|::...:|     
Human    10 SDLDCASSSGSD---------LSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASE----- 60

  Fly    76 DGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSG 140
                      :...::||::.|            .|...:..||.:   ||.:...|        
Human    61 ----------VPGAQDDEQERR------------RRRGRTRVRSEA---LLHSLRRS-------- 92

  Fly   141 GGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNE 205
                                     |:|..|.|||.|..|::.|...||.::|:.|.|.||:|.|
Human    93 -------------------------RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIE 132

  Fly   206 ILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNN------------NDNRMANGHAADGENLE 258
            .||.|..||..|...|....:..|....|.::.|..            :|.......||....|.
Human   133 TLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLS 197

  Fly   259 NPDVP 263
            :|..|
Human   198 DPSSP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/58 (43%)
NEUROG1NP_006152.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..83 12/74 (16%)
bHLH_TS_NGN1_NeuroD3 82..153 CDD:381559 29/106 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..209 6/28 (21%)

Return to query results.
Submit another query.