DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and tx

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster


Alignment Length:314 Identity:69/314 - (21%)
Similarity:110/314 - (35%) Gaps:82/314 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RDTAAGRHPPALLRHATPHLQPKTESISDGDGD-AELSDFSLNDTEEDEEDLRDYIVLNGNQADA 109
            |.||:.|.....||      |.:.:..|:.||: |.|:||.|   |.|.                
  Fly    29 RKTASARGEKYSLR------QKRQKRGSNEDGESANLADFQL---ELDP---------------- 68

  Fly   110 NRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRE 174
                .:.|.|.||.                          ||.:...:........|:...|.||
  Fly    69 ----IAEPASKSRK--------------------------NAPTKSKTKAPPLSKYRRKTANARE 103

  Fly   175 RWRQQNVSGAFAELRKLVP-------THPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHP 232
            |.|.:.::.||..||..||       ....::||:|...||.|:|||.:||..:     :.||:.
  Fly   104 RTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSI-----RDPSYE 163

  Fly   233 ---IRAQMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCERTDGQMHRNGIGHGHANGNAGND 294
               |...:|.:.|.....:..|.:...:|.| ||..:  |..:|.|...::.......:......
  Fly   164 SEFIGECLEESANREARVDLEANEEAEVELP-VPVAK--KPAKTKGSGKKSSAASKRQSQKQAKI 225

  Fly   295 LLMIAPGAVVKSELLLESTLPLGHPLNGPPLPLTTAPLAMAETQRISGTVSGVK 348
            :..|.|   :.|.....:|..:|.|.:.     ..|.|:.:.....|.:..|::
  Fly   226 VPQIPP---ISSGESCYATSSIGSPASS-----AYASLSSSSNSHSSSSSPGLE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 23/65 (35%)
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 23/61 (38%)

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