DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Fer3

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster


Alignment Length:133 Identity:41/133 - (30%)
Similarity:59/133 - (44%) Gaps:27/133 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSK 203
            |..|..|||   :||...:........::...|.|||.|..|::.||.:||:.|||...:|:||:
  Fly    63 STNGRANGS---SSSSKKTRRRVASMAQRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSR 124

  Fly   204 NEILRSAIKYI----KLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMANGHAADGENLENPDVPP 264
            .|.||.||.||    :||:|      ..:.||..|:.:..:.|.:..|              .||
  Fly   125 IETLRLAITYIGFMAELLSG------TPSNSHKSRSDVYGSMNGHHQA--------------PPP 169

  Fly   265 VRH 267
            ..|
  Fly   170 AIH 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 26/62 (42%)
Fer3NP_524322.1 bHLH_TS_FERD3L_NATO3 79..142 CDD:381421 23/62 (37%)

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