DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and sage

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster


Alignment Length:242 Identity:58/242 - (23%)
Similarity:89/242 - (36%) Gaps:79/242 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SSGSSGHSQTNESPRSGHLNG-----------NGSMRDTAAGRHPPALLRHATPHLQPKTESISD 74
            |.||.|.::::|.|....|..           |.::....||     ||.:|..|  |.:.|.| 
  Fly    33 SGGSEGEAESSEQPVLLELGAPQSSSCPAVSLNYTLTADGAG-----LLAYAPTH--PHSYSPS- 89

  Fly    75 GDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPAS-------- 131
                                      |:.|.:.:|: ::...|.::|   ::..|.|        
  Fly    90 --------------------------VMGGYEKEAH-NMGLLPPTYS---VIPQPVSMWHAGQVA 124

  Fly   132 SGSSVG-----------------GSGGGGGNGSGGN-ASSGGGSGVGATGGVRKVFTNT---RER 175
            :||.||                 .|||...|.:..: |.....:.......:.|.:..|   |||
  Fly   125 TGSPVGLECNKPSELVPPPMYMSYSGGSIANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRER 189

  Fly   176 WRQQNVSGAFAELRKLVPTHPPD-KKLSKNEILRSAIKYIKLLTGIL 221
            .|.::::.||..||..:|...|: ||.||.|.||.||.||..|..:|
  Fly   190 TRMRDMNRAFDLLRSKLPISKPNGKKYSKIESLRIAINYINHLQAML 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/60 (42%)
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 23/54 (43%)

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