DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and tap

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster


Alignment Length:221 Identity:55/221 - (24%)
Similarity:78/221 - (35%) Gaps:40/221 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPHLQPKTESISDGDGDA 79
            ||....:|..||:.::.|               |.|.......|...||......:..|.|..||
  Fly    18 DEDDDDASFDSGYEKSFE---------------TEAQLSSRRRLDFGTPPTPAIPQPYSGGTWDA 67

  Fly    80 -ELSD-----FSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGG 138
             .||.     ..|.||.            :.:...:.|:|.....|.:.||:...|.:|......
  Fly    68 VPLSSPPAGFVGLLDTS------------SNHSTRSGRTLVEHLNSRATNGVFDPPLTSTPVKSP 120

  Fly   139 SGGGGGN-------GSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHP 196
            .......       |......|...:.|......|::..|.|||.|..|::.|..:||..:|:.|
  Fly   121 EDPNAPRPKRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLP 185

  Fly   197 PDKKLSKNEILRSAIKYIKLLTGILE 222
            .:.||:|.||||.|..||..|..:||
  Fly   186 EETKLTKIEILRFAHNYIFALEQVLE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/57 (44%)
tapNP_524124.1 bHLH_TS_NGN 155..211 CDD:381434 23/55 (42%)

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