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Protein Alignment HLH3B and Ferd3l
DIOPT Version :9
Sequence 1: | NP_525055.1 |
Gene: | HLH3B / 31249 |
FlyBaseID: | FBgn0011276 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102450.1 |
Gene: | Ferd3l / 366598 |
RGDID: | 1311812 |
Length: | 166 |
Species: | Rattus norvegicus |
Alignment Length: | 193 |
Identity: | 47/193 - (24%) |
Similarity: | 74/193 - (38%) |
Gaps: | 60/193 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 AAGRHPPALLRHATPHL--QPKTESISDGDG---------DAELSDFSLNDTEEDEEDLRDYIVL 102
|:.||| .|....|.: :.:|....:|.| :.|..:....|.||:||:
Rat 23 ASPRHP--FLCEFPPGVPFEDQTLGFREGRGLLQFEGRYQEVEGGEVDYEDPEEEEEE------- 78
Fly 103 NGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRK 167
|.......||...|: |..::|. .::
Rat 79 -GEGRGRVASLLGRPK---RKRVITY------------------------------------AQR 103
Fly 168 VFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPS 230
...|.|||.|..|::.||.:||:.|||...:|:||:.|.||.||.||..:|.:|:.::.:..|
Rat 104 QAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEEKEAS 166
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH3B | NP_525055.1 |
HLH |
171..222 |
CDD:197674 |
24/50 (48%) |
Ferd3l | NP_001102450.1 |
HLH |
102..154 |
CDD:278439 |
23/51 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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