DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Oli

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster


Alignment Length:200 Identity:51/200 - (25%)
Similarity:76/200 - (38%) Gaps:29/200 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PRSGHLNGNGSMRDTA---AGRHPPALLRHATPHLQP--KTESISDGDGDAELSDFSLNDTEEDE 93
            |..||:    .:..||   .|:||....  :.|...|  :|...|.|.|........::.....:
  Fly    14 PNHGHM----PIPPTANMLGGQHPAPTA--SPPQSVPGRRTPLGSVGLGGFYAQGMGMSQQPPTD 72

  Fly    94 EDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSG 158
            |:            ....|....|.|.:...:.....|.|::......||.:|||.|:    |..
  Fly    73 EN------------KPGPSAPEKPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNS----GKQ 121

  Fly   159 VGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVP-THPPD-KKLSKNEILRSAIKYIKLLTGIL 221
            ....|...::..|.|||.|..:::.|..|||.::| .|.|. :||||...|..|..||.:....|
  Fly   122 KNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNAL 186

  Fly   222 EWQQR 226
            |..:|
  Fly   187 EELRR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 22/60 (37%)
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 22/62 (35%)

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