DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and Tal1

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_063143802.1 Gene:Tal1 / 313507 RGDID:1306748 Length:335 Species:Rattus norvegicus


Alignment Length:372 Identity:91/372 - (24%)
Similarity:118/372 - (31%) Gaps:197/372 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGHSQTNESPRSGHLNGNGSMRDTAAGRHPPAL-------LRHATPHLQPKTESISDGDGDAELS 82
            :||::..|.|.|            .|.|..|.|       .|.|.|||                 
  Rat     2 AGHTRMTERPPS------------EAARSDPQLEGQEAAEARMAPPHL----------------- 37

  Fly    83 DFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASS--------GSSVGGS 139
                             ::|||...:.||:               |||.:        .|:.||.
  Rat    38 -----------------VLLNGVTKETNRA---------------APAETPVIELGARSSAGGGP 70

  Fly   140 GGGGG-------------------------------------------NGSG--------GNASS 153
            .||||                                           .|.|        ..|:.
  Rat    71 AGGGGAARDLKGRDAVATEARHRVPTTELCRPPGPAPAPAPASAPAELPGDGRMVQLSPPALAAP 135

  Fly   154 GG----------------GSG-------------------------VGATGG-----VRKVFTNT 172
            .|                |||                         :..|.|     ||::|||:
  Rat   136 AGPGRALLYSLSQPLASLGSGFFGEPDAFPMFTNNNRVKRRPSPYEMEITDGPHTKVVRRIFTNS 200

  Fly   173 RERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQA--------- 228
            |||||||||:|||||||||:||||||||||||||||.|:|||..|..:|..|:.:.         
  Rat   201 RERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAKPGKD 265

  Fly   229 ---------------PSHPIRAQMEPNNNDNRMANGHAADGENLENP 260
                           |...::..:.||::.....:|.|:.....|.|
  Rat   266 PMVGAGGGGAGGGIPPEDLLQDVLSPNSSCGSSLDGAASPDSYTEEP 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 44/58 (76%)
Tal1XP_063143802.1 None

Return to query results.
Submit another query.