Protein Alignment HLH3B and Msc

DIOPT Version :9

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: XP_008761698.1
• Gene: Msc / 312897
• RGDID: 1305496
• Length: 220
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 59/215 - (27%)
• Similarity: 83/215 - (38%)
• Gaps: 45/215 - (20%)

  Fly    21 SSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPHLQPKTESISDGDGDAELSDFS 85
            |:||.      ..|....:.|...:....|.:.|| |||....:..|...|.::.:
  Rat     2 STGSV------SDPEDTEMRGLQRVYPAPASKRPP-LLRPERSYASPSDNSSAEEE--------- 50

  Fly    86 LNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGN 150
              |.:.:||.        |....|.......||              |:...|:|||.|: :|..
  Rat    51 --DPDGEEEP--------GTVGAAGGCKRKRPR--------------GADASGAGGGAGS-TGKK 90

  Fly   151 ASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIK 215
            |....||........|.. .|.|||.|.:.:|.||:.|:..:|..|||.||||.:.||.|..||.
  Rat    91 ALPPKGSAAECKQSQRNA-ANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIA 154

  Fly   216 LLTGILEWQQRQAPS--HPI 233
            .|..:|: :.|...|  ||:
  Rat   155 HLRQLLQ-EDRYEDSYVHPV 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	HLH	171..222	CDD:197674	23/50 (46%)
Msc	XP_008761698.1	bHLH_TS_musculin	102..167	CDD:381546	26/66 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810