DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and l(1)sc

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster


Alignment Length:90 Identity:27/90 - (30%)
Similarity:42/90 - (46%) Gaps:11/90 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NTRERWRQQNVSGAFAELRKLVPT----------HPPDKKLSKNEILRSAIKYIKLLTGILEWQQ 225
            |.|||.|.:.|:..|..||:.:|.          ....|||||.:.||.|::||:.|..:|:...
  Fly    89 NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGT 153

  Fly   226 RQAPSHPIRAQMEPNNNDNRMANGH 250
            ..:..| |....:.::||....|.:
  Fly   154 ASSTRH-IYNSADESSNDGSSYNDY 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 22/63 (35%)
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 17/54 (31%)

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