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Protein Alignment HLH3B and sc
DIOPT Version :9
Sequence 1: | NP_525055.1 |
Gene: | HLH3B / 31249 |
FlyBaseID: | FBgn0011276 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Alignment Length: | 135 |
Identity: | 38/135 - (28%) |
Similarity: | 63/135 - (46%) |
Gaps: | 26/135 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 IVLNGNQADANRSLSSSPRSHSRNGL-LTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATG 163
::..|||.....::....|.::..|: ||..:.|.||: |.| ||.....|..:.
Fly 47 LIPGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSL----------SPG--SSPAPYNVDQSQ 99
Fly 164 GVRKVFTNTRERWRQQNVSGAFAELRKLVPT-----------HPPDKKLSKNEILRSAIKYIKLL 217
.|:: .|.|||.|.:.|:.:||.||:.:|. ..|.||:||.:.||.|::||:.|
Fly 100 SVQR--RNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRL 162
Fly 218 TGILE 222
..:::
Fly 163 QDLVD 167
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH3B | NP_525055.1 |
HLH |
171..222 |
CDD:197674 |
22/61 (36%) |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
21/57 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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