Protein Alignment HLH3B and Mesp1

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001101001.1
• Gene: Mesp1 / 308766
• RGDID: 1311751
• Length: 242
• Species: Rattus norvegicus
• Alignment Length: 170
• Identity: 46/170 - (27%)
• Similarity: 68/170 - (40%)
• Gaps: 38/170 - (22%)

  Fly   117 PRSHSRNGLLTAPASSGSSVGGSGG-------------GGGNGSGGNASSGGGSGVGATGGVRKV 168
            |...|......:||.|..|..|:..             .|..|..|...|..|||       ::.
  Rat    22 PSMPSDGDSFCSPAWSSDSWDGAQASSPALPCARPARRAGTPGRRGTHGSRLGSG-------QRQ 79

  Fly   169 FTNTRERWRQQNVSGAFAELRKLVP--THPPDKKLSKNEILRSAIKYIKLLTGILEW------QQ 225
            ..:.||:.|.:.::.|..|||:.:|  ..|..:.|:|.|.||.||:||..|:.:|..      ||
  Rat    80 SASEREKLRMRTLARALHELRRFLPPSVAPIGQNLTKIETLRLAIRYIGHLSAVLGLSEDSLRQQ 144

  Fly   226 RQAPSHPIRAQMEPNNNDNRMANGHAADGENLENPDVPPV 265
            |.|.| |....:.|::.        .|..::| .|.:.||
  Rat   145 RHAVS-PRGCPLCPDSG--------LAQAQSL-GPHLSPV 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	20/66 (30%)
Mesp1	NP_001101001.1	bHLH_SF	77..141	CDD:469605	20/63 (32%)