DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Neurog1

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_062080.1 Gene:Neurog1 / 29410 RGDID:3167 Length:244 Species:Rattus norvegicus


Alignment Length:182 Identity:52/182 - (28%)
Similarity:73/182 - (40%) Gaps:27/182 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PKTESISDGDGDAELSDFSLNDTEEDEED---LRDYIVLNGNQADANRSLSSSPRSHSRNGLLTA 128
            |....:||.|..:..|...|:....||||   |:.....:|....|.||               |
  Rat     4 PLETCLSDLDCASSNSGSDLSSFLTDEEDCARLQPLASTSGLSVPARRS---------------A 53

  Fly   129 PASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGV------RKVFTNTRERWRQQNVSGAFAE 187
            |..||:|   :..||.:.........|.:.|.:...:      |:|..|.|||.|..|::.|...
  Rat    54 PTLSGAS---NVPGGQDEEQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDA 115

  Fly   188 LRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEP 239
            ||.::|:.|.|.||:|.|.||.|..||..|...|....:..|....|.::.|
  Rat   116 LRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLP 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/58 (43%)
Neurog1NP_062080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..84 13/58 (22%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 25/70 (36%)

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