Protein Alignment HLH3B and Mesp2

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001099743.1
• Gene: Mesp2 / 293046
• RGDID: 1305959
• Length: 368
• Species: Rattus norvegicus
• Alignment Length: 353
• Identity: 79/353 - (22%)
• Similarity: 109/353 - (30%)
• Gaps: 148/353 - (41%)

  Fly   113 LSSSPRSHSRNGL----------------LTAPASSGSSVGGS---GGGGGNGSGGNASSGGGSG 158
            ::.||:..|..||                .|:||||..|.|..   .....:.|.|.|.|...:.
  Rat     1 MAQSPQPQSLQGLDHWVFSQGWGWARHSDSTSPASSSDSSGSCPCYATRPPSQSTGPARSARNTQ 65

  Fly   159 VG---------ATGGVRKVFTNTRERWRQQNVSGAFAELRKLVP--THPPDKKLSKNEILRSAIK 212
            |.         |..|.::...:.||:.|.:.::.|..|||:.:|  ..|..:.|:|.|.||.||:
  Rat    66 VAPNAPRRARPAPAGGQRQSASEREKLRMRTLARALQELRRFLPPSVAPAGQSLTKIETLRLAIR 130

  Fly   213 YI---KLLTGILEWQQR----------------QAP--SHPIRAQM------------------- 237
            ||   ..|.|:.|...|                |.|  |.|.:|||
  Rat   131 YIGHLSALLGLSEDSLRRRRRRSADAAFSHRCPQCPDDSSPSQAQMLGPSLGSDISSGLSWGCPP 195

  Fly   238 -------EPNNNDNRMAN---------------------GHAADGENLENPDVPPVRHIKCERTD 274
                   .|.|..:|::|                     ..|||..:...|...|...|..|
  Rat   196 ACPGPIISPENLGSRISNVDPWVTPPYCSQIQSPLHQSLERAADTSHWAPPHACPGMQISPE--- 257

  Fly   275 GQMHRNGIGHGHANGNAGN-----DLLMIAPGAVVKSELLLESTLPLGHPLNGPPLPLTTAPLAM 334
               .||..||..|:.....     ..|.::|          |..|.||.|   |.||
  Rat   258 ---PRNKTGHWTASTEPAELTKVYQSLSVSP----------EPCLALGSP---PLLP-------- 298

  Fly   335 AETQRISGTVSGVKSASGRSSKRRLKPE 362
                              |.|.:||:|:
  Rat   299 ------------------RPSCQRLQPQ 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	21/63 (33%)
Mesp2	NP_001099743.1	bHLH_TS_Mesp	82..146	CDD:381508	21/63 (33%)