Protein Alignment HLH3B and Fer1

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001262334.1
• Gene: Fer1 / 2768661
• FlyBaseID: FBgn0037475
• Length: 256
• Species: Drosophila melanogaster
• Alignment Length: 285
• Identity: 67/285 - (23%)
• Similarity: 99/285 - (34%)
• Gaps: 97/285 - (34%)

  Fly    57 LLRHATPHLQPKTESISDGD---GDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSS-SP 117
            :.||.....|....|.|..|   ||.       :.:|.|:||.......|.:|.:..::... |.
  Fly    13 MARHFFEGSQATNASTSSSDYFFGDE-------HSSESDDEDDAYSSGFNSDQENTEKTFCPFSR 70

  Fly   118 RSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVS 182
            |||....|..|...:                                .::...|.|||.|.|:::
  Fly    71 RSHKPRRLKCASQMA--------------------------------QQRQAANLRERRRMQSIN 103

  Fly   183 GAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMA 247
            .||..||..:||.|.:|:|||.:.|:.||.||..|:.::              :.:.|.|:
  Fly   104 EAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMV--------------KKDKNGNE---- 150

  Fly   248 NGHAADGENLEN--PDVPPVRHIKCERTDGQMH-----RNGIGHGHANGNAGNDLLMIAPGAVVK 305
                 .|.:|:.  ...||.:.|..:||.|..|     |.|..:               ||
  Fly   151 -----PGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRY---------------PG---- 191

  Fly   306 SELLLESTLPLGHPLNGP---PLPL 327
            |:|...:..|  ....||   ||||
  Fly   192 SKLYARTWTP--EDPRGPHSQPLPL 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	23/58 (40%)
Fer1	NP_001262334.1	bHLH_TS_PTF1A	87..142	CDD:381423	23/54 (43%)