DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and PTF1A

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_835455.1 Gene:PTF1A / 256297 HGNCID:23734 Length:328 Species:Homo sapiens


Alignment Length:204 Identity:54/204 - (26%)
Similarity:75/204 - (36%) Gaps:60/204 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QPKTESISDGDGDAELSDFSLNDTEEDEE----DLRDYIVLNGNQADANRSLSSSPRSHSRNGLL 126
            |...:.:.|||   ||    |.|.:.:.|    .|.:|...:|      ..|...|...:....|
Human    30 QSSRDPLEDGD---EL----LADEQAEVEFLSHQLHEYCYRDG------ACLLLQPAPPAAPLAL 81

  Fly   127 TAPASSGSSVGGSGGGGGNGSGGNASSGG--------------------------------GSGV 159
            ..|:|.|......|||||......|..||                                |:..
Human    82 APPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPSCLAYPCAGAAVLSPGARLRGLSGAAA 146

  Fly   160 GATGGVRKV-----------FTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKY 213
            .|....|:|           ..|.|||.|.|:::.||..||..:||.|.:|:|||.:.||.||.|
Human   147 AAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGY 211

  Fly   214 IKLLTGILE 222
            |..|:.:::
Human   212 INFLSELVQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 26/68 (38%)
PTF1ANP_835455.1 bHLH_TS_PTF1A 165..219 CDD:381423 24/53 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..278
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.

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