DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Ascl2

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:153 Identity:44/153 - (28%)
Similarity:59/153 - (38%) Gaps:46/153 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PRSHSRNG----LLTAPASSGSSVGG----------SGGGGG------------------NGSGG 149
            ||.|...|    :..|||.:.|.:.|          ||..|.                  ..||.
  Rat    46 PREHFSCGAPKPVAGAPALNASLMDGGALPRLVPTSSGVAGACTARRRPPSPELLRCSRRRRSGA 110

  Fly   150 NASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYI 214
            ..:|...:.|..        .|.|||.|.:.|:..|..||:.||....:|||||.|.||||::||
  Rat   111 TEASSSSAAVAR--------RNERERNRVKLVNLGFQALRQHVPHGGANKKLSKVETLRSAVEYI 167

  Fly   215 KLLTGILEWQQRQAPSHPIRAQM 237
            :.|..:|      |....:||.:
  Rat   168 RALQRLL------AEHDAVRAAL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 24/50 (48%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 6/48 (13%)
HLH 134..176 CDD:197674 20/47 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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