DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and Ascl5

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001257538.1 Gene:Ascl5 / 226439 MGIID:2685043 Length:188 Species:Mus musculus


Alignment Length:145 Identity:40/145 - (27%)
Similarity:55/145 - (37%) Gaps:44/145 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRA 235
            |.|||.|.:.|:..:|.||..:|....:|:|||.|.||:||:|||.|..:|......||      
Mouse    86 NERERQRVKCVNEGYARLRGHLPGALTEKRLSKVETLRAAIRYIKYLQELLSATPDGAP------ 144

  Fly   236 QMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCERTDGQMHRNGIGHGHANGNAGNDLLMIAP 300
              .|..:                    ||..|.                ||:|....:.|:..:.
Mouse   145 --PPATS--------------------PPPAHT----------------GHSNVPQPSSLVAESS 171

  Fly   301 GAVVKSELLLESTLP 315
            |:...|...|||..|
Mouse   172 GSPFSSSPFLESEEP 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 24/53 (45%)
Ascl5NP_001257538.1 bHLH_TS_ASCL5 76..136 CDD:381590 23/49 (47%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 80..93 4/6 (67%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 94..132 17/37 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..188 16/92 (17%)

Return to query results.
Submit another query.