DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Ptf1a

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_061279.2 Gene:Ptf1a / 19213 MGIID:1328312 Length:324 Species:Mus musculus


Alignment Length:180 Identity:54/180 - (30%)
Similarity:82/180 - (45%) Gaps:28/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RDTAAGRHPPALLRHATPHLQPKTESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADAN 110
            ||.|.....||  ..|.||               .|:...|.|..|.|::: .|.      .||.
Mouse    63 RDGACLLLQPA--PSAAPH---------------ALAPPPLGDPGEPEDNV-SYC------CDAG 103

  Fly   111 RSLSSSPRS-HSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKV--FTNT 172
            ..|::.|.| .|....|..|.::..| .|:..||.||:...|::.....|.:...::::  ..|.
Mouse   104 APLAAFPYSPGSPPSCLAYPCAAVLS-PGARLGGLNGAAAAAAARRRRRVRSEAELQQLRQAANV 167

  Fly   173 RERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILE 222
            |||.|.|:::.||..||..:||.|.:|:|||.:.||.||.||..|:.:::
Mouse   168 RERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 24/50 (48%)
Ptf1aNP_061279.2 HLH 162..217 CDD:238036 24/54 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..324
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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