DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and hlh-16

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_492372.2 Gene:hlh-16 / 183973 WormBaseID:WBGene00001960 Length:146 Species:Caenorhabditis elegans


Alignment Length:107 Identity:30/107 - (28%)
Similarity:48/107 - (44%) Gaps:23/107 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NTRERWRQQNVSGAFAELRKLVPTHPPD---KKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHP 232
            |:|||.|...::..|..||:.:| :|.:   :::||...|..|..:||.|..         .:| 
 Worm    46 NSRERRRMHELNDEFETLRECLP-YPNEANSRRMSKANTLLLASNWIKQLAN---------ANH- 99

  Fly   233 IRAQMEPNNNDNRMANGHAADG--ENLENPDVPPVRHIKCER 272
             :.|||.|     |||. ..|.  ..|:..:.|..:..||::
 Worm   100 -KLQMELN-----MANA-KIDSLMVQLKKVEKPSSKCSKCQQ 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 17/56 (30%)
hlh-16NP_492372.2 bHLH_TS 42..96 CDD:381396 17/50 (34%)

Return to query results.
Submit another query.