DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Nhlh1

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_035046.1 Gene:Nhlh1 / 18071 MGIID:98481 Length:133 Species:Mus musculus


Alignment Length:127 Identity:52/127 - (40%)
Similarity:59/127 - (46%) Gaps:28/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGG------NASSGGGSG---------------VG 160
            |.:||..      .|..|..||..|..|.|||.      .:|..|.||               ..
Mouse    13 PPTHSET------ESGFSDCGGGPGPDGAGSGDPGVVQVRSSELGESGRKDLQHLSREERRRRRR 71

  Fly   161 ATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILE 222
            ||...|.... ||||.|.:..:.||||||||:||.||||||||.||||.||.||..|..:|:
Mouse    72 ATAKYRTAHA-TRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 32/50 (64%)
Nhlh1NP_035046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78 18/70 (26%)
HLH 77..127 CDD:306515 32/50 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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