DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Neurod2

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_035025.3 Gene:Neurod2 / 18013 MGIID:107755 Length:383 Species:Mus musculus


Alignment Length:309 Identity:64/309 - (20%)
Similarity:112/309 - (36%) Gaps:83/309 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPSSSNGADNADERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPHLQPK 68
            :|..::..|..|:...:..|.:       .|:.....|:|:.....|.:  |..||......:|.
Mouse    15 VPKFASWGDGDDDEPRSDKGDA-------PPQPPPAPGSGAPGPARAAK--PVSLRGGEEIPEPT 70

  Fly    69 TESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSG 133
            ...:.: :|:       |...||:||:..:.:    ::|:..|.....|:...    :|......
Mouse    71 LAEVKE-EGE-------LGGEEEEEEEEEEGL----DEAEGERPKKRGPKKRK----MTKARLER 119

  Fly   134 SSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPD 198
            |.                             :|:...|.|||.|..:::.|...|||:||.:...
Mouse   120 SK-----------------------------LRRQKANARERNRMHDLNAALDNLRKVVPCYSKT 155

  Fly   199 KKLSKNEILRSAIKYIKLLTGILEWQQR---------------QAPSHPIRAQMEPNNND---NR 245
            :||||.|.||.|..||..|:.||...:|               |..::.:...::.|:.:   .:
Mouse   156 QKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQ 220

  Fly   246 MANG----HAADGENLENPDVPPVRHIKCERTDGQMHR--NGIGHGHAN 288
            .|:|    |.:.|....:|...|     |.|..|...:  .|:|.|.|:
Mouse   221 GADGAGRFHGSGGPFAMHPYPYP-----CSRLAGAQCQAAGGLGGGAAH 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/58 (43%)
Neurod2NP_035025.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..130 25/168 (15%)
bHLH_TS_NeuroD2 89..181 CDD:381563 30/128 (23%)
Nuclear localization signal. /evidence=ECO:0000255 108..114 0/9 (0%)
Neuro_bHLH 181..311 CDD:463621 16/89 (18%)

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