Protein Alignment HLH3B and Msc

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001398640.1
• Gene: Msc / 17681
• MGIID: 1333884
• Length: 238
• Species: Mus musculus
• Alignment Length: 215
• Identity: 60/215 - (27%)
• Similarity: 81/215 - (37%)
• Gaps: 47/215 - (21%)

  Fly    21 SSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPHLQPKTESISDGDGDAELSDFS 85
            |:||.      ..|....:.|...:....|.:.|| |||....:..|              ||.|
Mouse     2 STGSV------SDPEDSEMRGLQRVYPAPASKRPP-LLRMERGYGSP--------------SDIS 45

  Fly    86 LNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGN 150
            ..:.|:.||:                     |.|....|........|:..||:||..| |:|..
Mouse    46 SAEEEDGEEE---------------------PGSLGAAGGCKRKRLRGADAGGAGGRAG-GAGKK 88

  Fly   151 ASSGGGSGVGATGGVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIK 215
            .....||........|.. .|.|||.|.:.:|.||:.|:..:|..|||.||||.:.||.|..||.
Mouse    89 PLPPKGSAAECKQSQRNA-ANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIA 152

  Fly   216 LLTGILEWQQRQAPS--HPI 233
            .|..:|: :.|...|  ||:
Mouse   153 HLRQLLQ-EDRYEDSYVHPV 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	25/58 (43%)
Msc	NP_001398640.1	bHLH_TS_musculin	100..165	CDD:381546	26/66 (39%)