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Protein Alignment HLH3B and hlh-3
DIOPT Version :9
Sequence 1: | NP_525055.1 |
Gene: | HLH3B / 31249 |
FlyBaseID: | FBgn0011276 |
Length: | 376 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_495938.4 |
Gene: | hlh-3 / 174447 |
WormBaseID: | WBGene00001950 |
Length: | 170 |
Species: | Caenorhabditis elegans |
Alignment Length: | 181 |
Identity: | 44/181 - (24%) |
Similarity: | 67/181 - (37%) |
Gaps: | 54/181 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 112 SLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERW 176
|.||:|.:.:: .|:||.|||... .|...|.|||.
Worm 4 STSSTPSTSTK-----IPSSSKSSVTKQ--------------------------TKQKRNERERK 37
Fly 177 RQQNVSGAFAELRKLVPTHPPDK-KLSKNEILRSAIKYIKLLTGILEWQQRQAPSH--------- 231
|...|:..|..|::.||....:| ||||.|.||.|.:||: |.|::...|.
Worm 38 RVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYIQ------ELQKQLGMSSTSFHNSMPA 96
Fly 232 ----PIRAQMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCERTDGQMH 278
|.::.:.|.:..:.||. ....:..:|..||.:.:...:.|...|
Worm 97 DFPTPEQSPVYPQSVCSMMAQ---TPSPSYTSPYYPPPQMMSSNQHDMSSH 144
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HLH3B | NP_525055.1 |
HLH |
171..222 |
CDD:197674 |
21/51 (41%) |
hlh-3 | NP_495938.4 |
HLH |
32..83 |
CDD:197674 |
23/56 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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