DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and hlh-3

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_495938.4 Gene:hlh-3 / 174447 WormBaseID:WBGene00001950 Length:170 Species:Caenorhabditis elegans


Alignment Length:181 Identity:44/181 - (24%)
Similarity:67/181 - (37%) Gaps:54/181 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 SLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERW 176
            |.||:|.:.::     .|:||.|||...                          .|...|.|||.
 Worm     4 STSSTPSTSTK-----IPSSSKSSVTKQ--------------------------TKQKRNERERK 37

  Fly   177 RQQNVSGAFAELRKLVPTHPPDK-KLSKNEILRSAIKYIKLLTGILEWQQRQAPSH--------- 231
            |...|:..|..|::.||....:| ||||.|.||.|.:||:      |.|::...|.         
 Worm    38 RVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYIQ------ELQKQLGMSSTSFHNSMPA 96

  Fly   232 ----PIRAQMEPNNNDNRMANGHAADGENLENPDVPPVRHIKCERTDGQMH 278
                |.::.:.|.:..:.||.   ....:..:|..||.:.:...:.|...|
 Worm    97 DFPTPEQSPVYPQSVCSMMAQ---TPSPSYTSPYYPPPQMMSSNQHDMSSH 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 21/51 (41%)
hlh-3NP_495938.4 HLH 32..83 CDD:197674 23/56 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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