DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and Fer2

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_061508640.1 Gene:Fer2 / 1271473 VectorBaseID:AGAMI1_010069 Length:264 Species:Anopheles gambiae


Alignment Length:296 Identity:69/296 - (23%)
Similarity:99/296 - (33%) Gaps:130/296 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 SLSSSPRS----HSRNGLLTAPASSG--------SSVGGSGGGGGNGSGGNASSGGGSG------ 158
            |.||.|.|    ||.:..|.|...|.        ::..|:||.|.:.:|.:|...|.:|      
Mosquito    12 SSSSPPLSGIGFHSFDDELMADLPSCVYAQHHQLNAAPGNGGAGSSSAGHSAGHSGHTGNAPPNL 76

  Fly   159 ------------------------------VGATGG-----------VRKVFTNTRERWR----- 177
                                          :..|.|           :::..||.|||.|     
Mosquito    77 RLNPTSIRQMQHQYLHHTECLDSSTPPSPSLSTTMGTHPYNPPPYNKMQRQQTNVRERKRMMRSA 141

  Fly   178 ------QQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQ 236
                  ..:::.||.|||..|||.|.:|:|||.:.||.||.||.||..:||              
Mosquito   142 PNGSTINSSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYIALLREVLE-------------- 192

  Fly   237 MEPNNNDNRMANGHAADGENLENPDVPPVRHI-KCERTDGQMHRNGIGHGHANGNAGNDL----- 295
                                   .|..|:.:: ||.|.:.:..|     .|.|   .:||     
Mosquito   193 -----------------------ADYDPLTYVEKCLRGEIKADR-----AHWN---TSDLTARLS 226

  Fly   296 ------LMIAPG-AVVKSELLLESTLPLGHPLNGPP 324
                  |.:.|| ..:.:.|.|.|:..:|  ..|||
Mosquito   227 WINWENLGVHPGRRTILTSLALGSSESMG--ACGPP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 29/69 (42%)
Fer2XP_061508640.1 None

Return to query results.
Submit another query.