DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Neurod6

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_033847.1 Gene:Neurod6 / 11922 MGIID:106593 Length:337 Species:Mus musculus


Alignment Length:208 Identity:51/208 - (24%)
Similarity:72/208 - (34%) Gaps:52/208 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 SGVGATGGVRKVFT---------------NTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEI 206
            :|:....|:||..|               |.|||.|...::.|...|||:||.:...:||||.|.
Mouse    71 NGLSRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIET 135

  Fly   207 LRSAIKYIKLLTGILEWQQR---------------QAPSHPIRAQMEPNNNDNRMANGHAADGEN 256
            ||.|..||..|:.||...:|               |..::.:...::.|.....|..|..| ..:
Mouse   136 LRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGCLQLNARSFLMGQGGEA-AHH 199

  Fly   257 LENP---DVPPVRHIKCERTDGQMHRNGIGHGHANGNAGNDLLMIAPGAVVKSELLLESTLP--- 315
            ..:|   ..||            .|...:.....:|...|...|.........|...|||.|   
Mouse   200 TRSPYSTFYPP------------YHSPELATPPGHGTLDNSKSMKPYNYCSAYESFYESTSPECA 252

  Fly   316 ---LGHPLNGPPL 325
               ...||:.||:
Mouse   253 SPQFEGPLSPPPI 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 27/73 (37%)
Neurod6NP_033847.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..80 2/8 (25%)
Nuclear localization signal. /evidence=ECO:0000255 80..86 3/5 (60%)
bHLH_TS_NeuroD6_ATOH2 82..151 CDD:381565 24/68 (35%)
Neuro_bHLH 153..272 CDD:463621 22/126 (17%)

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