DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and Ferd3l

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_277057.1 Gene:Ferd3l / 114712 MGIID:2150010 Length:168 Species:Mus musculus


Alignment Length:197 Identity:48/197 - (24%)
Similarity:73/197 - (37%) Gaps:66/197 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AAGRH------PPAL--------LRHATP-HLQPKTESISDGDGDAELSDFSLNDTEEDEEDLRD 98
            |:.||      ||.:        .|...| .|....|...:.:||    :....|.||:||:   
Mouse    23 ASPRHPLLCEFPPGVPFGDRTLGYREGRPGRLSQFDERYQEVEGD----EVEYEDPEEEEEE--- 80

  Fly    99 YIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATG 163
                 |.......||...|:   |..::|.                                   
Mouse    81 -----GEGRGRVASLLGRPK---RKRVITY----------------------------------- 102

  Fly   164 GVRKVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQA 228
             .::...|.|||.|..|::.||.:||:.|||...:|:||:.|.||.||.||..:|.:|:.::.:.
Mouse   103 -AQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLQSKEEKE 166

  Fly   229 PS 230
            .|
Mouse   167 AS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 24/50 (48%)
Ferd3lNP_277057.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88 8/34 (24%)
bHLH domain 104..159 24/54 (44%)
HLH 104..156 CDD:278439 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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