DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HLH3B and Tcf24

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001272354.1 Gene:Tcf24 / 100039596 MGIID:3780500 Length:166 Species:Mus musculus


Alignment Length:121 Identity:47/121 - (38%)
Similarity:58/121 - (47%) Gaps:15/121 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 SSSPRSHSRNGLLTAP--ASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERW 176
            :|||||...    .||  |:...|.|.:|.|....||..|.||||....|..        .|||.
Mouse     7 ASSPRSAES----AAPPAAARDWSPGPTGTGPTGLSGVAARSGGGRPAAANA--------ARERS 59

  Fly   177 RQQNVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHP 232
            |.|.:..||.||::.:|:.|||.||||.::|..|..||..||..|: ....||..|
Mouse    60 RVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQ-DDTDAPGDP 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 24/58 (41%)
Tcf24NP_001272354.1 bHLH_TS_TCF24 49..104 CDD:381553 24/62 (39%)

Return to query results.
Submit another query.