DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and neurog3

DIOPT Version :10

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_002935814.2 Gene:neurog3 / 100038294 XenbaseID:XB-GENE-876279 Length:226 Species:Xenopus tropicalis


Alignment Length:171 Identity:47/171 - (27%)
Similarity:68/171 - (39%) Gaps:48/171 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PHLQPKTES-----ISDGDGDAELSDFSLNDTEEDEEDL---RDYIVLNGNQADANRSLSSSPRS 119
            ||:|.::||     |||.    |:..||...|.:.:..|   .|..:::|         .|.||.
 Frog     8 PHMQRRSESELYYEISDN----EVPPFSPPCTPDSQLSLAESEDCTLVDG---------YSHPRG 59

  Fly   120 HSRN----GLLTAPASSGSSVGGSGGGGGNGSGGNASSGGGSGVGATGGVRKVFTNTRERWRQQN 180
            :.|.    ..:.:...|.::|......                       |:|..|.|||.|..|
 Frog    60 NERKKQKVKRMRSKVKSNTTVIKQRRN-----------------------RRVKANDRERNRMHN 101

  Fly   181 VSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGIL 221
            ::.|...||.::||.|.|.||:|.|.||.|..||..|:..|
 Frog   102 LNSALDALRSVLPTFPDDAKLTKIETLRFAHNYIWALSETL 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 26/56 (46%)
neurog3XP_002935814.2 bHLH_TS_NGN3_ATOH5 80..147 CDD:381561 27/86 (31%)

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