Protein Alignment HLH3B and scxa

DIOPT Version :10

• Sequence 1: NP_525055.1
• Gene: HLH3B / 31249
• FlyBaseID: FBgn0011276
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_001076538.2
• Gene: scxa / 100034489
• ZFINID: ZDB-GENE-060503-414
• Length: 204
• Species: Danio rerio
• Alignment Length: 182
• Identity: 57/182 - (31%)
• Similarity: 77/182 - (42%)
• Gaps: 30/182 - (16%)

  Fly    82 SDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSG--SSVG----GSG 140
            ||.|:  ..||:|        ||::     |..|..||...:       :||  ..||    .|.
Zfish    17 SDISM--MSEDDE--------NGSE-----SSGSDDRSFHLD-------TSGYDLKVGRKRKSSV 59

  Fly   141 GGGGNGSGGNASSGGGSGVGATGGVR-KVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKN 204
            ||||...|...:...|: :|....:| :...|.|||.|..:|:.||..||.|:||.|.|:||||.
Zfish    60 GGGGRLIGVTPTIPTGT-IGHVPEIRQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKI 123

  Fly   205 EILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMANGHAADGEN 256
            |.||.|..||..|..:|...:......|..:.....:|........:.|.||
Zfish   124 ETLRLASSYISHLGNVLLVGEACGDGQPCHSGGPSTSNYYHHHGSPSRDSEN 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HLH3B	NP_525055.1	bHLH_TS_dHLH3B_like	166..225	CDD:381551	28/59 (47%)
scxa	NP_001076538.2	bHLH_TS_scleraxis	82..149	CDD:381521	28/66 (42%)