DRSC/TRiP Functional Genomics Resources

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Protein Alignment HLH3B and scxa

DIOPT Version :9

Sequence 1:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001076538.2 Gene:scxa / 100034489 ZFINID:ZDB-GENE-060503-414 Length:204 Species:Danio rerio


Alignment Length:182 Identity:57/182 - (31%)
Similarity:77/182 - (42%) Gaps:30/182 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 SDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRSHSRNGLLTAPASSG--SSVG----GSG 140
            ||.|:  ..||:|        ||::     |..|..||...:       :||  ..||    .|.
Zfish    17 SDISM--MSEDDE--------NGSE-----SSGSDDRSFHLD-------TSGYDLKVGRKRKSSV 59

  Fly   141 GGGGNGSGGNASSGGGSGVGATGGVR-KVFTNTRERWRQQNVSGAFAELRKLVPTHPPDKKLSKN 204
            ||||...|...:...|: :|....:| :...|.|||.|..:|:.||..||.|:||.|.|:||||.
Zfish    60 GGGGRLIGVTPTIPTGT-IGHVPEIRQRNAANARERDRTNSVNTAFTALRTLIPTEPADRKLSKI 123

  Fly   205 EILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEPNNNDNRMANGHAADGEN 256
            |.||.|..||..|..:|...:......|..:.....:|........:.|.||
Zfish   124 ETLRLASSYISHLGNVLLVGEACGDGQPCHSGGPSTSNYYHHHGSPSRDSEN 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HLH3BNP_525055.1 HLH 171..222 CDD:197674 26/50 (52%)
scxaNP_001076538.2 HLH 85..136 CDD:278439 25/50 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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