DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sgg and ATSK12

DIOPT Version :9

Sequence 1:NP_001259193.1 Gene:sgg / 31248 FlyBaseID:FBgn0003371 Length:1168 Species:Drosophila melanogaster
Sequence 2:NP_187235.1 Gene:ATSK12 / 819753 AraportID:AT3G05840 Length:409 Species:Arabidopsis thaliana


Alignment Length:400 Identity:236/400 - (59%)
Similarity:299/400 - (74%) Gaps:21/400 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 MKQLIGKLNDLWPEHSVALSIPKEVDRSKEKLEGAWETTGRDGSK-------ITTVVATPGQGTD 640
            :::..|.:.|       |..:|:|:...|.:.:...|.|..:|:.       :||:....||.. 
plant    12 VRESTGNVTD-------ADRLPEEMKDMKIQDDKEMEATIVNGNVTETGHIIVTTIGGRNGQPK- 68

  Fly   641 RVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCNIVKLLY 705
              |.:||...:|:|:||||||||||..:|||.|||||||||||:||||||.||.|:|.|:|.|.:
plant    69 --QTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKH 131

  Fly   706 FFYSSGEKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMYQLFRSLAYIH-SLGIC 769
            .|:|:.|| ||::|||||||:||||::|.:.|.|..|.:|:.:::||.||:||||:||| .:|:|
plant   132 CFFSTTEK-DELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYVKLYTYQIFRSLSYIHRCIGVC 195

  Fly   770 HRDIKPQNLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSA 834
            ||||||||||::|.|..:|||||||||.|:.||||:|||||||||||||||||..|||.||||||
plant   196 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSA 260

  Fly   835 GCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIR 899
            ||||||||||||:|||:||||||||:||||||||||:|:.||||||||||||||:|||.|:|..|
plant   261 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKR 325

  Fly   900 TPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNGRDMPPLFNFTEHELSIQP- 963
            .|.||::|||.||:|:|:.|...|.:..|||||||| :.|..|||||.:||||||..|||...| 
plant   326 MPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDELR-DPNARLPNGRFLPPLFNFKPHELKGVPV 389

  Fly   964 SLVPQLLPKH 973
            .:|.:|:|:|
plant   390 EMVAKLVPEH 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sggNP_001259193.1 STKc_GSK3 643..934 CDD:271039 200/291 (69%)
S_TKc 647..931 CDD:214567 195/284 (69%)
ATSK12NP_187235.1 STKc_GSK3 68..360 CDD:271039 200/295 (68%)
S_TKc 73..357 CDD:214567 195/284 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 418 1.000 Domainoid score I124
eggNOG 1 0.900 - - E2759_KOG0658
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 462 1.000 Inparanoid score I363
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D990896at2759
OrthoFinder 1 1.000 - - FOG0000635
OrthoInspector 1 1.000 - - mtm986
orthoMCL 1 0.900 - - OOG6_100482
Panther 1 1.100 - - O PTHR24057
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X378
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

Return to query results.
Submit another query.