DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv3 and PKD2L1

DIOPT Version :9

Sequence 1:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_057196.2 Gene:PKD2L1 / 9033 HGNCID:9011 Length:805 Species:Homo sapiens


Alignment Length:740 Identity:162/740 - (21%)
Similarity:300/740 - (40%) Gaps:163/740 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KMIAHDLFIYGPYFLCLMCLVLVTRDQTLYHNTRIITDLFMYNHTDYTGL--QEVYFLNQLFDFI 185
            |....:|.:|..:.:.:..|.......:.|:.|:::::||::..:| ||:  |.:..:...:||.
Human    98 KTTLRELLVYIVFLVDICLLTYGMTSSSAYYYTKVMSELFLHTPSD-TGVSFQAISSMADFWDFA 161

  Fly   186 ESTLVLA------FNSNSTESGSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSD-----T 239
            :..|:.:      :|:.|...||..:.:.| ::||||.|||||:|.|....:......|     .
Human   162 QGPLLDSLYWTKWYNNQSLGHGSHSFIYYE-NMLLGVPRLRQLKVRNDSCVVHEDFREDILSCYD 225

  Fly   240 YYMPD--WQLPYRKLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFDHVGSLNSYPELAGYVSLLA 302
            .|.||  .|||:..  ::...|..:.            ...|..|.|.|.|.||.. .||...|.
Human   226 VYSPDKEEQLPFGP--FNGTAWTYHS------------QDELGGFSHWGRLTSYSG-GGYYLDLP 275

  Fly   303 RSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAK 367
            .|...|.:.:..|.|..||...|..|||||::||.::|||.:..|.||....||.:|..|:.:.|
Human   276 GSRQGSAEALRALQEGLWLDRGTRVVFIDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTVK 340

  Fly   368 LLENVDQMPYTGLLALLIYVLVFIQFAQTLAVKLWYEPHL-----LKSVWNKLDLFIFMVNVLVV 427
            |:..|....:. ::...:...|||.:   ..|:...|.|:     |.|:||.|||.:.:::::.|
Human   341 LIRYVSNWDFF-IVGCEVIFCVFIFY---YVVEEILELHIHRLRYLSSIWNILDLVVILLSIVAV 401

  Fly   428 VLVVLR----ESLVASMMKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLWRVLQFAS 488
            ...:.|    ..|:..::::....:..||:.|.: ::.:.:..:.:.|    ..:::::.:.|..
Human   402 GFHIFRTLEVNRLMGKLLQQPNTYADFEFLAFWQ-TQYNNMNAVNLFF----AWIKIFKYISFNK 461

  Fly   489 VFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVV--TINGNYSSNFNKLVK---SMVMCMCYSF 548
            .....:.|  ||..|......|::.|::.|.:|.:  .:.|....||:..:|   :....:...|
Human   462 TMTQLSST--LARCAKDILGFAVMFFIVFFAYAQLGYLLFGTQVENFSTFIKCIFTQFRIILGDF 524

  Fly   549 GFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYFT------------------ 595
            .::|      :.:..:.||...:....|.:..:|:|:|:::|||.::                  
Human   525 DYNA------IDNANRILGPAYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQKDELQLSDL 583

  Fly   596 ---------------------VAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRN 639
                                 |.|.::..|:|.:...|...:.|.........:|......:.|:
Human   584 LKQGYNKTLLRLRLRKERVSDVQKVLQGGEQEIQFEDFTNTLRELGHAEHEITELTATFTKFDRD 648

  Fly   640 GRTVAENVSRKLDSMDRQRLMRRRLRQ------------GRHHVSRP--------------VSAE 678
            |       :|.||..:::: ||:.|.:            ||..||.|              ||.|
Human   649 G-------NRILDEKEQEK-MRQDLEEERVALNTEIEKLGRSIVSSPQGKSGPEAARAGGWVSGE 705

  Fly   679 D------ALLEYKDRGDKMVNVHYILNIQLTLIRMFLFDEYVEW------PQEQQ--KQPE---A 726
            :      .:|:.:...:.:|:....:..:|.::      |...|      .:||.  |.|:   |
Human   706 EFYMLTRRVLQLETVLEGVVSQIDAVGSKLKML------ERKGWLAPSPGVKEQAIWKHPQPAPA 764

  Fly   727 QDPDPNLGPDGSPPQD---KRQDEA 748
            ..||| .|..|....:   ||::||
Human   765 VTPDP-WGVQGGQESEVPYKREEEA 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv3NP_001284831.1 PKD_channel 170..595 CDD:285288 111/453 (25%)
PKD2L1NP_057196.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59
PKD_channel 147..567 CDD:400395 109/452 (24%)
Fer4_24 702..735 CDD:407943 5/32 (16%)
Required for homooligomerization 704..763 10/64 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..805 11/31 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46093
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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