DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv3 and PKD2L2

DIOPT Version :9

Sequence 1:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_001287850.1 Gene:PKD2L2 / 27039 HGNCID:9012 Length:624 Species:Homo sapiens


Alignment Length:646 Identity:146/646 - (22%)
Similarity:261/646 - (40%) Gaps:138/646 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 YFLCLMCLVLVTRDQT---LYHNTRIITDLFMYNHT---DYTGLQEVYFLNQLFDFIESTLVLAF 193
            ||:.|:.|.::|....   :|:..::::.||:....   :.|..:.:..:...:.|:|..|:...
Human    35 YFIFLINLCILTFGMVNPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGL 99

  Fly   194 NSNSTESGSPGWAHAEQ-------------SVLLGVMRLRQLRVSNPQVGLGPPKFSD------- 238
            ..:|       |.:.:|             ::||||.|:|||:|.|....:    :|.       
Human   100 YWDS-------WYNNQQLYNLKNSSRIYYENILLGVPRVRQLKVRNNTCKV----YSSFQSLMSE 153

  Fly   239 ---TYYMPDWQLPYRKLHYSDKYWR-----IYEPWIPIKMGFEFLDALLMNFDHVGSLNSYPELA 295
               .|...:..|....|..:.: ||     ...||                  |.|.|..|.. .
Human   154 CYGKYTSANEDLSNFGLQINTE-WRYSTSNTNSPW------------------HWGFLGVYRN-G 198

  Fly   296 GYVSLLARSAANSM-KVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVEKTPFGGIVP 359
            ||:..|::|.:.:. |.|| |..|.|:|..|..:||||:|||.:||||.|..|..|....|||:.
Human   199 GYIFTLSKSKSETKNKFID-LRLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILT 262

  Fly   360 DVQVDSAKLLENVDQMPY-TGLLALLIYVLVFIQFAQTLAVKLWYEPHLLKSVWNKLDLFIFMV- 422
            ..|..|.|||..|....| .....:...:.:|:...|.:.....::....||:||.|:|.:.:: 
Human   263 SWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLC 327

  Fly   423 ------NVLVVVLVVLRESLVASMMKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLW 481
                  |....|.:.|   |:..::|..|     ::.||...:..|    |....:|.||....|
Human   328 FVAVSFNTYYNVQIFL---LLGQLLKSTE-----KYSDFYFLACWH----IYYNNIIAITIFFAW 380

  Fly   482 -RVLQFASVFKLFTRTLYLAWSAVAST---------AIAIVIFLIGFCFAVV--TINGNYSSNFN 534
             ::.:|.|    |.:|:    |.::||         ..||:.|:|.|.:|.:  .:.|:...:|:
Human   381 IKIFKFIS----FNKTM----SQLSSTLSRCVKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFS 437

  Fly   535 KLVKSM-----VMCMCYSFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYF 594
            ....|:     ::...::|....|..|.        ||.:.:....|.:..:|:|:|:::|||.:
Human   438 TFQNSIFAQFRIVLGDFNFAGIQQANPI--------LGPIYFITFIFFVFFVLLNMFLAIINDTY 494

  Fly   595 TVAKTIRDSERENRITFFEFLVVEFSGVLGRFR--KLPCWRRNYVRNGRTVAENVSR------KL 651
            :..|......|.......:.:...:..||.:||  |.........:....:||...|      ::
Human   495 SEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEI 559

  Fly   652 DSMDRQRLMRRRLRQGRHHVS-----RPVSAED--ALLEYKDRGDKMVNVHYILNIQLTLI 705
            .:.::.:..:.||.:..:.:.     :||:.|:  .|..|....:|  .:||| |::|..:
Human   560 QNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYAVELEK--ELHYI-NLKLNQV 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv3NP_001284831.1 PKD_channel 170..595 CDD:285288 115/478 (24%)
PKD2L2NP_001287850.1 PKD_channel 76..497 CDD:332708 115/480 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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