DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv3 and LOXHD1

DIOPT Version :10

Sequence 1:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_001371403.1 Gene:LOXHD1 / 125336 HGNCID:26521 Length:2273 Species:Homo sapiens


Alignment Length:522 Identity:87/522 - (16%)
Similarity:164/522 - (31%) Gaps:194/522 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 SDKYWRIYEPWIPIKMGF------EF----LDALLMNFDHVGSLNSYPELAGYVSLLARSA-ANS 308
            |.:.|..|...   |.||      ||    ||..::....:|...:.||....|..|..:. ...
Human  1659 SKRIWLDYPRG---KRGFSRGSVEEFYVAGLDVGIIKKIELGHDGASPESCWLVEELCLAVPTQG 1720

  Fly   309 MKVIDYLSENHWLTLN-----TSAVF--IDFTLYNVDVNLFSICTL------------RVEKTPF 354
            .|.:  |:.|.||..:     ||.||  :|..:.|:.|.:....|:            .:..|.:
Human  1721 TKYM--LNCNCWLAKDRGDGITSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLY 1783

  Fly   355 G--GIVPDVQVDSAK-----------LLENVDQMPYTGLLALLIYVLVFIQFAQTLAVKL----- 401
            |  |...::|:|..|           ::|.:|..|:|                 .:.:::     
Human  1784 GINGSTEEMQLDKKKARFEREQNDTFIMEILDIAPFT-----------------KMRIRIDGLGS 1831

  Fly   402 ---WYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLRESLVASMMKKVEGASKMEFIDFRRPSRMHQ 463
               |:...:|....|..||.:|.....:..... :::||..|...::....||:           
Human  1832 RPEWFLERILLKNMNTGDLTMFYYGDWLSQRKG-KKTLVCEMCAVIDEEEMMEW----------- 1884

  Fly   464 LTTITIGFLICITTLRLWRVLQFASVFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVVTINGN 528
                 ..:.:.:.|..:......|:||                    |:||         ..||:
Human  1885 -----TSYTVAVKTSDILGAGTDANVF--------------------IIIF---------GENGD 1915

  Fly   529 -------YSSNFNKLVKSMVMCMCY----SFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLL 582
                   .|:|:||..::......:    |.|...:::   ::|..|  ||.....|::|     
Human  1916 SGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLR---VWHDNK--GIFPGWHLSYV----- 1970

  Fly   583 INVFVSLINDYFTVAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRNGRTVAENV 647
                            .::|:.|:....|                :..||......:|:||.:..
Human  1971 ----------------DVKDNSRDETFHF----------------QCDCWLSKSEGDGQTVRDFA 2003

  Fly   648 ---SRKLDSMDRQRLMRRRLRQGRHHVSRPVSAEDALLEYKDRGDKMVNVHYILNIQLTLIRMFL 709
               ::..|.::.                   :..:.::|..:.|:...||..||..:....:.||
Human  2004 CANNKICDELEE-------------------TTYEIVIETGNGGETRENVWLILEGRKNRSKEFL 2049

  Fly   710 FD 711
            .:
Human  2050 ME 2051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv3NP_001284831.1 Polycystin_dom 171..369 CDD:466668 34/156 (22%)
PKD_channel 370..595 CDD:462341 36/243 (15%)
LOXHD1NP_001371403.1 PLAT_repeat 44..162 CDD:238854
PLAT_repeat 172..289 CDD:238854
PLAT_repeat 296..414 CDD:238854
PLAT_repeat 425..542 CDD:238854
PLAT_repeat 554..675 CDD:238854
PLAT_repeat 684..805 CDD:238854
PLAT 816..>896 CDD:412108
PLAT_repeat 1022..1142 CDD:238854
PLAT_repeat 1175..1295 CDD:238854
PLAT_repeat 1306..1432 CDD:238854
PLAT_repeat 1460..1580 CDD:238854
PLAT 1629..1744 CDD:412108 22/89 (25%)
PLAT_repeat 1758..1875 CDD:238854 20/134 (15%)
PLAT_repeat 1885..2005 CDD:238854 29/190 (15%)
PLAT 2018..2119 CDD:412108 8/34 (24%)
PLAT_repeat 2154..2272 CDD:238854
Blue background indicates that the domain is not in the aligned region.

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