Sequence 1: | NP_001284831.1 | Gene: | brv3 / 31246 | FlyBaseID: | FBgn0040333 | Length: | 750 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952982.2 | Gene: | pkd1 / 100494429 | XenbaseID: | XB-GENE-483409 | Length: | 4354 | Species: | Xenopus tropicalis |
Alignment Length: | 797 | Identity: | 154/797 - (19%) |
---|---|---|---|
Similarity: | 300/797 - (37%) | Gaps: | 221/797 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 IGCMICIAVFAGFQHEDVKFKT-----MLVSIVIVLIFQFLIGDPIKFVILSIDRALWPPRIYIP 78
Fly 79 PRCDKDEMDEKEERRDFLKQRLINKRANLMLT------------SRYRNYKLNDQYKMIAHDLFI 131
Fly 132 YGPYFLCLMCLVLVT------RDQTLYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFDF----IE 186
Fly 187 STLVLAFNSNSTESGSPGWAHAEQSVLLGVMRLRQLRVSNP----------QVGLGPPKFSDTYY 241
Fly 242 MPDWQLPYRKLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFDHVGS----LNSYPELAGYVSLLA 302
Fly 303 RSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAK 367
Fly 368 LLENVDQMPYTG---LLALLIYVLVFIQF---AQTLAVK---LWYEPHLLKSVWNKLDLFIFMVN 423
Fly 424 VLVVVLVVLRESLVASM----MKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLWRVL 484
Fly 485 QFASVFKLFTRTLYLAWSAVASTA-----IAIVIFLIGFCFAVVTINGNYSSNFNKLVKSMVMCM 544
Fly 545 CYSFGFS---------AQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVS-LINDYFTVAKT 599
Fly 600 IRDSERENRITFF-------EFLVVEFSGVLGRFRKLPCWR--------RNYVR----------- 638
Fly 639 -------NGRTVA-----------ENVSRKLDSMDRQRLMRRRLRQGRHHVSRPVSAEDALLEYK 685
Fly 686 DRGDKMVNVHYILNIQL 702 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brv3 | NP_001284831.1 | PKD_channel | 170..595 | CDD:285288 | 97/470 (21%) |
pkd1 | XP_017952982.2 | LRR_8 | <83..114 | CDD:404697 | |
leucine-rich repeat | 83..103 | CDD:275378 | |||
leucine-rich repeat | 104..127 | CDD:275378 | |||
PCC | 108..2722 | CDD:188093 | |||
leucine-rich repeat | 128..140 | CDD:275378 | |||
GPS | 2996..3045 | CDD:413374 | |||
PLAT_polycystin | 3103..3222 | CDD:238850 | |||
PKD_channel | 3699..4102 | CDD:400395 | 97/477 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |