DRSC/TRiP Functional Genomics Resources

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Protein Alignment Seipin and AT1G29760

DIOPT Version :9

Sequence 1:NP_570012.1 Gene:Seipin / 31245 FlyBaseID:FBgn0040336 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_174269.1 Gene:AT1G29760 / 839854 AraportID:AT1G29760 Length:526 Species:Arabidopsis thaliana


Alignment Length:318 Identity:68/318 - (21%)
Similarity:120/318 - (37%) Gaps:68/318 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILLRLIVFALDP---LGLGRRFLIRPAVNLGWNVYDRVRSKADEKVGTVRELVLRLGLIAFAVVL 64
            :|....:|..||   :..|||||:.           ||...:|...|.:....|:......::| 
plant   203 LLRNCFLFFFDPFSTIRFGRRFLMA-----------RVAGISDMIFGYMNPFRLKDTKQMLSIV- 255

  Fly    65 IIWLAVFMYAAFYYVYMP----------------AISHTRPVHMQFKTCLETSTPCTFPHAHV-- 111
                ..|.:..|:.||:.                .|:.......:.|..|........|.|:|  
plant   256 ----CKFGWGMFWAVYVGIVLFGLLVSSLMIGGYVINRIADKPFEVKETLNFDYTKNSPEAYVPI 316

  Fly   112 ----------------SLTKKQQLLMV--GQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSM 158
                            .::|.:.|.::  .|...:|:::.:|||..|..||||.|..:....|..
plant   317 SSCAGVECEGSCKESNEMSKIRGLRVIPRDQKLDIILSMTLPESAYNKNLGMFQVRVDFLSVDGQ 381

  Fly   159 LRGHSCRSAMMRYRSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQ 223
            ......|..|:|:||..||::.|:......|.|:..|.|.:.:::  :...|:..|...:.:.|:
plant   382 TIASIRRPCMLRFRSEPIRLVQTFFKVVPLVTGYVSEIQTLSLKL--KGFVEKDIPTACLKIIIE 444

  Fly   224 SQKIQF---------YTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLL 272
             |:.:|         |..:|.:.:.....|.|::.|. .:..|.||.:||...::|.|
plant   445 -QRAEFRPGAGIPELYDASLSVESGLPFFRKIIWKWR-KTLFVWISMSLFITELLFTL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SeipinNP_570012.1 Seipin 63..262 CDD:284243 50/243 (21%)
AT1G29760NP_174269.1 Seipin 273..492 CDD:399628 45/222 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 46 1.000 Domainoid score I4581
eggNOG 1 0.900 - - E1_KOG4200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I2641
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21212
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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