DRSC/TRiP Functional Genomics Resources

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Protein Alignment Seipin and Bscl2

DIOPT Version :9

Sequence 1:NP_570012.1 Gene:Seipin / 31245 FlyBaseID:FBgn0040336 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001012171.2 Gene:Bscl2 / 361722 RGDID:1308135 Length:437 Species:Rattus norvegicus


Alignment Length:352 Identity:116/352 - (32%)
Similarity:194/352 - (55%) Gaps:34/352 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GTVRELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQFKTCLETSTP--CTFPH 108
            |..|.|:|:.|::...::|::|::||:|.:|||.|||.:||..|||..::|..::||.  |:||.
  Rat    82 GRARRLMLQFGVLFCTILLLLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSTASLCSFPV 146

  Fly   109 AHVSLTK--KQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSMLRGHSCRSAMMRY 171
            |:|||||  :.::||.||.|:|.:.:::||||.|.:||||:|..........:...|.||.|:.|
  Rat   147 ANVSLTKSGRDRVLMYGQPYRVTLELELPESPVNQDLGMFLVTVSCYTRGGRIISTSSRSVMLHY 211

  Fly   172 RSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQFYTVTLHI 236
            ||.|::|:.|.|.|.|.:.|:.|:.|.:.||::|.|.|....|.|...:|:.|:::|.|...|.|
  Rat   212 RSQLLQMLDTLVFSSLLLFGFAEQKQLLEVELYSDYRENSYVPTTGAIIEVHSKRVQMYGAYLRI 276

  Fly   237 VADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSWYHWS-DAKW---LHSVQIKYARLTKS- 296
            .|.||||||:::|:|:..|.|.:::|..|:.|:.|.|:..|. .|.|   ..|:|:...:...| 
  Rat   277 HAHFTGLRYLLYNFPMTCAFVGVASNFTFLSVIALFSYMQWVWGAVWPRHRFSLQVNIRQRDNSG 341

  Fly   297 ---------LEPGVIHSKASSLRDDDDD---------LVAYSDKSDIADVGGDTLSDVDADD--- 340
                     .:||...::.|.:.:|.:.         .::..:|.:...:.|:...:.:|.|   
  Rat   342 HGAQRRISRHQPGQASTQQSDVTEDGESPEDPSGTEGQLSEEEKPEKQPLNGEGEQEPEASDGSW 406

  Fly   341 ---LVLVKKSRSG-KRESPDALRKRPT 363
               .:|.:.|.|. ..|:..:||:|.|
  Rat   407 EDAALLTEASTSALAPETLGSLRQRQT 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SeipinNP_570012.1 Seipin 63..262 CDD:284243 84/202 (42%)
Bscl2NP_001012171.2 Seipin 99..303 CDD:399628 84/203 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I3608
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I3725
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1390748at2759
OrthoFinder 1 1.000 - - FOG0004864
OrthoInspector 1 1.000 - - oto97495
orthoMCL 1 0.900 - - OOG6_104060
Panther 1 1.100 - - LDO PTHR21212
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4543
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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