DRSC/TRiP Functional Genomics Resources

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Protein Alignment Seipin and SPAC3A11.04

DIOPT Version :9

Sequence 1:NP_570012.1 Gene:Seipin / 31245 FlyBaseID:FBgn0040336 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001342865.1 Gene:SPAC3A11.04 / 2543056 PomBaseID:SPAC3A11.04 Length:249 Species:Schizosaccharomyces pombe


Alignment Length:252 Identity:64/252 - (25%)
Similarity:108/252 - (42%) Gaps:49/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LGLIAFAVVLIIWLAVF---------MYAAFYYVYMPAISHTRPVHMQFKTCLETSTPCTFPHA- 109
            :|.:.....|::|:.|.         .|..||...:|......||:..:.|.|      .||.| 
pombe     1 MGYLVKLFKLVVWMLVIGLFSIPSLVSYVIFYDTVIPHSVIQYPVYFNYTTGL------NFPTAE 59

  Fly   110 ----HVSLTKKQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSMLRGHSCRSAMMR 170
                |.|:..:    :.|.:   ::.|.||.||:|..:|.|||..:.:|.:........|:.::.
pombe    60 VRLDHFSIDPR----LPGTS---LLQIKMPHSPRNSAMGNFMVSVDFQDRNQRSLKQVKRTVLLP 117

  Fly   171 YRSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIF-SRYLEERQHPIT-------------DVYVE 221
            :|||:...:...|.||||.:|..||...|.|.:| |....:..:.||             ...|:
pombe   118 HRSPIHEYLKLIVCSPLYFMGILEETDIVNVRLFESETFAKSFNSITTLSVRFSVKNTPAQAIVK 182

  Fly   222 IQSQKIQFYTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFI------LVVFLL 272
            |.|:.|:||..||...:...|:|:.|:...|.:.:|  .|:||:.      ::.:|:
pombe   183 IYSKDIEFYEATLAFASKLHGMRWFMYTHKVSAFLV--FTSLFWFTGITSTIITYLI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SeipinNP_570012.1 Seipin 63..262 CDD:284243 59/226 (26%)
SPAC3A11.04NP_001342865.1 Seipin 22..224 CDD:310999 58/216 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 65 1.000 Domainoid score I2847
eggNOG 1 0.900 - - E1_KOG4200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 68 1.000 Inparanoid score I1946
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004864
OrthoInspector 1 1.000 - - oto101467
orthoMCL 1 0.900 - - OOG6_104060
Panther 1 1.100 - - LDO PTHR21212
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R150
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.890

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