DRSC/TRiP Functional Genomics Resources

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Protein Alignment Seipin and bscl2

DIOPT Version :9

Sequence 1:NP_570012.1 Gene:Seipin / 31245 FlyBaseID:FBgn0040336 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_031756498.1 Gene:bscl2 / 100494985 XenbaseID:XB-GENE-956631 Length:344 Species:Xenopus tropicalis


Alignment Length:306 Identity:99/306 - (32%)
Similarity:171/306 - (55%) Gaps:24/306 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EKVGTV-----RELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQFKTCLE--T 100
            |::|.:     |.:.|:..::...::|::|::||:|.:|||.|||.:.::.|||.|:.:..|  .
 Frog    14 EEMGLLMFLRARRIFLQAAILLCVLLLLLWVSVFLYGSFYYSYMPTVKYSSPVHYQYSSTCEPPP 78

  Fly   101 STPCTFPHAHVSLTK--KQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYDSMLRGHS 163
            ...|:||.::|||.:  :.::||.||.|::.:.:.:|||..|.::|||||..............:
 Frog    79 GILCSFPMSNVSLLRNNRDRVLMHGQPYRISLELQLPESTVNQDMGMFMVTMSCYTRGGKQISFT 143

  Fly   164 CRSAMMRYRSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQ 228
            .||||:.|:|||:|.:.|...||:.:||..|:.|.:.||::|.|.|:...|.....::|||.:||
 Frog   144 ARSAMLHYKSPLLRTMETLASSPMLLLGLSEQKQTLEVELYSEYREDSYIPTVGAVIQIQSVRIQ 208

  Fly   229 FYTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSWYHWSDAKWLHSVQIKYARL 293
            .|:..|.:.|.||||||:::|:|:.||::.||:|..|:.|:..||:..|...:         .||
 Frog   209 IYSAELRVHAYFTGLRYLLYNFPITSAVIGISSNFIFLSVLVFLSYLQWGFGR---------TRL 264

  Fly   294 TKSLEPGVIHSKASSLRDDDDDLVAYSDKSDIADVGGDTLSDVDAD 339
            ....:    .::.|...|...:.|:.:|..|..|.  :|:...|:|
 Frog   265 QDMQD----RTRDSRRADTRQESVSQTDDKDQPDT--ETIGQNDSD 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SeipinNP_570012.1 Seipin 63..262 CDD:284243 78/202 (39%)
bscl2XP_031756498.1 Seipin 49..243 CDD:399628 74/193 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 164 1.000 Domainoid score I3904
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I3841
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1390748at2759
OrthoFinder 1 1.000 - - FOG0004864
OrthoInspector 1 1.000 - - oto104188
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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