DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan5

DIOPT Version :9

Sequence 1:NP_001245504.1 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001072198.1 Gene:tspan5 / 779644 XenbaseID:XB-GENE-868310 Length:268 Species:Xenopus tropicalis


Alignment Length:288 Identity:115/288 - (39%)
Similarity:167/288 - (57%) Gaps:26/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GRGYSGIEVHEVMHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGS--VR 81
            |:.|.|.|            ||.|:||.||..|.:|||.|...||:|::|:.:|...:|.|  ..
 Frog     3 GKHYKGPE------------VSCCIKYFIFGFNVIFWLLGITFLGVGLWAWSEKGVLSNISSITD 55

  Fly    82 LENFYDVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVC 146
            |..|..|:|     .::.|.|:|::.|:||:||||||||||||:|:.|.:.|.||:...::.||.
 Frog    56 LGGFDPVWL-----FLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVF 115

  Fly   147 PQYMNTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNC--SSPSV 209
            ..::...|: .|.:..|.:||||.||||.|||.|:.::|||.  .|..||:.|.||||  ::.|.
 Frog   116 KDWIKDQLQ-FFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA--FGADDWNLNIYFNCTDANASR 177

  Fly   210 EKCGVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNA 274
            |:||||:|||  ..|.:..::|..|||.|:..|..:..:.|.|.||:.....|.:.||.::||..
 Frog   178 ERCGVPFSCC--TKDPAEDVINTQCGYDVRQKPELDQQETIHTKGCVPQFEKWLQDNLTIVAGVF 240

  Fly   275 LGIALIQLLVIYLAKTLEGQIELQKSRW 302
            :||||:|:..|.||:.|...||..::.|
 Frog   241 IGIALLQIFGICLAQNLVSDIEAVRASW 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_001245504.1 Tetraspannin 42..295 CDD:278750 106/256 (41%)
penumbra_like_LEL 144..267 CDD:239411 49/124 (40%)
tspan5NP_001072198.1 TM4SF9_like_LEL 113..233 CDD:239412 49/124 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.030

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