DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan34a

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001038906.2 Gene:tspan34a / 751731 ZFINID:ZDB-GENE-060825-202 Length:243 Species:Danio rerio


Alignment Length:262 Identity:67/262 - (25%)
Similarity:115/262 - (43%) Gaps:44/262 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYD----------VFLNISLVMI 97
            :|.|:|:.|.:.:|.|..:|.:|::...|:       |.|..|.:          ...||..::|
Zfish     7 LKVMMFVFNGIIFLAGAAVLAVGIWVAVDR-------VSLLGFLEHIEDAPPELAQLANIGYLLI 64

  Fly    98 LAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVC-PQYMNTFLE--KQFT 159
            ..|..:.::.|.||.||::|:..:|..:.:.:|:.||:|:|.|:|.||. |....|..|  ::..
Zfish    65 GVGAFLAIMGFLGCCGAVKESKCMLLTFFIIVLIIFLVEVAAAVVLFVFEPVVQETLNEIGQKVA 129

  Fly   160 HKIIHSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATD 224
            ..|..:|..|....:..:....|.||||.:|  |.|:|.:.:...:|...|||            
Zfish   130 KSIKDNYGKDEPFSSIWNTTMNELKCCGYNN--YTDFSGSNFVEETSMYPEKC------------ 180

  Fly   225 ISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAK 289
                     |..|.|......|...: .:||...:....|.|..::||.|||||.:::..:.::.
Zfish   181 ---------CSSGSQRCDERAAEDAV-IAGCFRTLVKLIEDNALLLAGVALGIAALEIAAMVVSM 235

  Fly   290 TL 291
            .|
Zfish   236 IL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 41/156 (26%)
penumbra_like_LEL 144..267 CDD:239411 28/125 (22%)
tspan34aNP_001038906.2 Tetraspanin 7..239 CDD:459767 67/262 (26%)
tetraspanin_LEL <134..213 CDD:239401 22/102 (22%)

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