DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan11

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:262 Identity:65/262 - (24%)
Similarity:116/262 - (44%) Gaps:32/262 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANG--SVRLENFYDVFLNISLVMILAGTVIFL 105
            :||::|:.||.||:.|..::.:|::...:|    :|  |:...:   .|...:.::|..|.::..
Mouse    16 LKYLLFIFNFFFWVGGAAVMAVGIWTLVEK----SGYLSILASS---TFAASAYILIFVGGLVMT 73

  Fly   106 VSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRDD- 169
            ..|.|....:||....|..|...||:.||:|:...::..|..|.::..|:......:...|... 
Mouse    74 TGFLGFGAIIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKWHLNSTLTEHYGQPR 138

  Fly   170 -PDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCG--VPYSCCINATDISSGLVN 231
             .::...:|..||:|||||.::|.  ||..:.|.    .|.|..|  ||.|||        ..|.
Mouse   139 AAEITASVDRLQQDFKCCGSNSSA--DWQHSAYI----LSQEALGRQVPDSCC--------KTVV 189

  Fly   232 IMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQIE 296
            ..||   |.|......|:  ..||:..:..:...:|.::....:|:|.:|:..:.|...|..:::
Mouse   190 ARCG---QRAHPSNIYKV--EGGCMAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCLHRRLQ 249

  Fly   297 LQ 298
            .|
Mouse   250 QQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 36/147 (24%)
penumbra_like_LEL 144..267 CDD:239411 32/126 (25%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 63/253 (25%)
CD151_like_LEL 112..220 CDD:239408 32/126 (25%)

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