Protein Alignment Tsp3A and upk1a

DIOPT Version :10

• Sequence 1: NP_525054.2
• Gene: Tsp3A / 31244
• FlyBaseID: FBgn0040334
• Length: 304
• Species: Drosophila melanogaster
• Sequence 2: NP_001035332.1
• Gene: upk1a / 678515
• ZFINID: ZDB-GENE-060421-2603
• Length: 250
• Species: Danio rerio
• Alignment Length: 223
• Identity: 44/223 - (19%)
• Similarity: 78/223 - (34%)
• Gaps: 51/223 - (22%)

  Fly    87 DVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYM- 150
            |:|.. :.:.|..|...||....|...||:.:..|:..|.:.:.:.||.|.|.||.......|:
Zfish    50 DIFAG-AWIAIFTGFAFFLTCIFGIFAALKRSRALMLVYLIIMFIIFLFESASAITSATNRDYLV 113

  Fly   151 --NTFLEKQFTHKIIHSYRDDPDLQNFIDFAQQ-------------EFKCCGLSNSGYQDW---- 196
              :..::||.             ||.:.|.:.|             :.:|||.  .|..||
Zfish   114 GNSNLVKKQM-------------LQYYADSSTQGQQITMTWNNVMTQVQCCGA--DGPTDWIQYN 163

  Fly   197 -SKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVR 260
             :..:.|..:|.      .|..||...:.....:..|.|..||        |..::|.||.:.:.
Zfish   164 STYRQLFGAASL------WPLGCCKRQSSNFEVVDPIGCKAGV--------TSSMFTQGCFQYIE 214

  Fly   261 VWAEHNLYVIAGNALGIALIQLLVIYLA 288
            .......:.::.....:.::....:.:|
Zfish   215 SVLSRYTWAVSWYGFSVLMLVFFTLVIA 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp3A	NP_525054.2	Tetraspanin	43..>187	CDD:459767	25/115 (22%)
		penumbra_like_LEL	144..267	CDD:239411	26/143 (18%)
upk1a	NP_001035332.1	uroplakin_I_like_LEL	103..221	CDD:239409	27/146 (18%)