DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and prph2a

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:307 Identity:67/307 - (21%)
Similarity:122/307 - (39%) Gaps:67/307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 MIFLLNFVFWLFGGLLLGIGVY-----AFRDKWEDANGSVRLENFYDVFLNISLVMILAGTVIFL 105
            |::|:.:...:.|.|:..:|::     ..|.:..|.|.|..:.|   :.:.:.|:      ...|
Zfish    19 MLWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPN---ILIGVGLL------ACCL 74

  Fly   106 VSFSG--CVGALRENTF-----LLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKII 163
            .:|.|  |..:|..:.:     ::..:.:|.|:|..|.:..|.:||.    |...||......:.
Zfish    75 NAFGGKVCYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFA----MRIPLEFTLAEGLK 135

  Fly   164 H--SYRDDPD------LQNFIDFAQQEFKCCGLSNSGYQDWSK-----NEYFNCSSPSVE----- 210
            :  .|..|.|      ::..:|..|.||:|||  |:.|:||.:     |.|.:.|:..|:     
Zfish   136 NGMKYYKDTDTPGRCYMKRTLDLMQMEFRCCG--NNNYKDWFEIQWVSNRYLDFSAKEVKDRISS 198

  Fly   211 -------KCGVPYSCCINATD---ISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEH 265
                   ..|||:|||..::.   |...:.|....|...:  ..|... ||..||.:.:..:...
Zfish   199 NVDGKYLMDGVPFSCCNPSSPRPCIQQQITNNSAHYSYDH--YTEDLN-IWKRGCRDALVSYYGG 260

  Fly   266 NLYVIAGNALGIALIQLLVI----YLAKTLEGQI-----ELQKSRWL 303
            .:..|....|.:.|:|..|:    |:..:|...:     |.:...|:
Zfish   261 MMNTIGVLVLLVTLLQSAVMIGLQYINTSLSTLVNPEDPESESEGWI 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 34/160 (21%)
penumbra_like_LEL 144..267 CDD:239411 36/150 (24%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 34/160 (21%)
peripherin_like_LEL 120..262 CDD:239415 36/150 (24%)

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