DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and prph2lb

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001104664.1 Gene:prph2lb / 567873 ZFINID:ZDB-GENE-041001-147 Length:359 Species:Danio rerio


Alignment Length:330 Identity:70/330 - (21%)
Similarity:115/330 - (34%) Gaps:114/330 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 MIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFL----NISLVMILAGTVIFLV 106
            ::::||:|..:.|..|..:|::.          .|.:|...::..    ::..::|..|.....:
Zfish    19 VLWVLNWVSVVTGVTLFSMGLFL----------KVEIEKRRELMSKEIDSVPNMLICVGLTACAI 73

  Fly   107 SFSG------CVGA---LRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKI 162
            :|.|      ||..   ||....:|. |..|...|....:..|::|:        .:.|.....:
Zfish    74 NFLGGKICYDCVDTTKFLRWKLLMLP-YITCTFFFTFCILVGALMCY--------SMRKDLEESL 129

  Fly   163 IHSYRD------DPD------LQNFIDFAQQEFKCCGLSNSGYQD-----WSKNEYFNCS-SPSV 209
            ....||      |.|      ::..:|..|.:|:|||  |.||:|     |..|.|.|.| |..|
Zfish   130 YFGLRDAMRYYKDTDMPGRCYIKRTMDMLQMQFQCCG--NGGYRDWFHIQWISNRYLNLSNSDVV 192

  Fly   210 EKC-----------GVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTS---------- 253
            |:.           |||:|||        ||.          :|.|.....|..:          
Zfish   193 ERIRSNVEGKYLIDGVPFSCC--------GLY----------SPRPCIQHQITNNSAHYNYDYLK 239

  Fly   254 --------GCIEIVRVWAEHNLYVIAGNALGIALIQLL-------VIYLAKTLE-----GQIELQ 298
                    ||::.:   .||...::....|.:.:|.|.       |.||...:|     |..:.:
Zfish   240 EDLNLNRRGCLQAL---LEHYTQIMQSIGLIVLIIWLFEVSVLTGVRYLQTAMENVLRQGDPDCE 301

  Fly   299 KSRWL 303
            ...||
Zfish   302 SDGWL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 31/165 (19%)
penumbra_like_LEL 144..267 CDD:239411 38/169 (22%)
prph2lbNP_001104664.1 Tetraspanin 16..>166 CDD:459767 31/165 (19%)
peripherin_like_LEL 119..261 CDD:239415 38/172 (22%)

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