DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and Tspan3

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_062767.3 Gene:Tspan3 / 56434 MGIID:1928098 Length:253 Species:Mus musculus


Alignment Length:254 Identity:65/254 - (25%)
Similarity:112/254 - (44%) Gaps:38/254 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSQC----VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFY-DVFLNISLVMIL 98
            :.||    .|.::..||.:||...|:|..:|.|.| ..::|      .::|: ||:.....|:|:
Mouse     1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVF-ITYDD------YDHFFEDVYTLFPAVVII 58

  Fly    99 A-GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKI 162
            | |.::|::...||...:||:...|..:...|||.|:.|:.:.::.:|....:...:::.. .|:
Mouse    59 AVGALLFIIGLIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSI-QKV 122

  Fly   163 IHSYR--DDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCC-INATD 224
            ..:|.  :.......||:.|::..|||:.|  |.||...::|.    ..:...||.||| ..|..
Mouse   123 YKTYNGTNSDAASRAIDYVQRQLHCCGIHN--YSDWENTDWFK----ETKNQSVPLSCCRETAKS 181

  Fly   225 ISSGLVNIMCGYGVQNAPVPEATKLIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLL 283
            .:..|.|            |..   ::..||..:|....:..|..:...||..|.||||
Mouse   182 CNGSLAN------------PSD---LYAEGCEALVVKKLQEILMHVIWAALAFAAIQLL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 36/147 (24%)
penumbra_like_LEL 144..267 CDD:239411 26/125 (21%)
Tspan3NP_062767.3 Tetraspanin 9..235 CDD:459767 63/246 (26%)
TM4SF8_like_LEL 104..210 CDD:239416 26/127 (20%)

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