DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp3A and tspan37

DIOPT Version :10

Sequence 1:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001292501.1 Gene:tspan37 / 564334 ZFINID:ZDB-GENE-070912-550 Length:245 Species:Danio rerio


Alignment Length:297 Identity:68/297 - (22%)
Similarity:122/297 - (41%) Gaps:84/297 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MAGGRGYSGIEVHEVMHPHHFTYVSQCVKYMIFLLNFVFWLFGGLLL-GIGVYAFRDKWEDANGS 79
            ||..||..|:.:.              :..::|||..:..|.|..|| ...||           .
Zfish     1 MALNRGAIGLFLK--------------ITCLLFLLTGITGLGGSFLLHKYRVY-----------G 40

  Fly    80 VRLENFYDVFLNISLVMILAGTVIFLVSFSGCVGALRENTFLLKFYSMC---LLLFFLLEMAIAI 141
            :...|.|.:|  .:|:.:::|.::|:....||:.:.::.:        |   |.::||    |.:
Zfish    41 LFFSNLYIIF--PALLAVVSGAILFITGSIGCLVSSKKPS--------CGHGLFVYFL----IIV 91

  Fly   142 VCFV-----CPQYMNTFLEKQFT--HKIIHSYRD---DPDLQNFIDFAQQEFKCCGLSNSGYQDW 196
            .|.|     ...:....|:.:..  ..:..:|.:   |||.: .:|..|.|.:|||:.|  |.||
Zfish    92 FCVVGTTAALAYFYQGKLDAELAPLKDVFQNYSNNSQDPDTK-AVDRLQSELQCCGVMN--YTDW 153

  Fly   197 SKNEYFNCSSPSVEKCGVPYSCCINATDISSGLVNIMCGYGVQNAPVPEATKLIWTSGC---IEI 258
            .:..:||.|.    |..||.||| |.|..|       |. |..:||:     |::...|   ::.
Zfish   154 LQTPWFNHSG----KYDVPQSCC-NTTFHS-------CN-GTLDAPM-----LLYNEACQVKLKE 200

  Fly   259 VRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLEGQI 295
            :.:...|.:::       .:|:.|:::.|:....||:
Zfish   201 LLLLVVHIIHI-------TSLVVLVLLVLSWITVGQL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 33/157 (21%)
penumbra_like_LEL 144..267 CDD:239411 35/135 (26%)
tspan37NP_001292501.1 Tetraspanin 14..>146 CDD:459767 33/157 (21%)
TM4SF8_like_LEL 102..195 CDD:239416 32/113 (28%)

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